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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THCA cis rs875971 1 rs4717300 chr7:65947380 RABGEF1 chr7:66093890-66276446:+ 0.65 14.04 9.5E-38 Aortic root size
THCA cis rs801193 1 rs4717310 chr7:66161007 GUSB chr7:65425675-65447246:- 0.33 6.7 5.78E-11 Aortic root size
THCA cis rs801193 1 rs4717310 chr7:66161007 RABGEF1 chr7:66093890-66276446:+ 0.51 10.49 2.54E-23 Aortic root size
THCA cis rs801193 1 rs4717310 chr7:66161007 TYW1 chr7:66461817-66704496:+ 0.18 3.97 8.27E-5 Aortic root size
THCA cis rs801193 1 rs4717319 chr7:66242593 GUSB chr7:65425675-65447246:- 0.34 6.88 1.88E-11 Aortic root size
THCA cis rs801193 1 rs4717319 chr7:66242593 RABGEF1 chr7:66093890-66276446:+ 0.52 10.72 3.69E-24 Aortic root size
THCA cis rs801193 1 rs4717319 chr7:66242593 TYW1 chr7:66461817-66704496:+ 0.18 3.96 8.52E-5 Aortic root size
THCA cis rs2243480 1 rs4718269 chr7:65200778 CCT6P1 chr7:65216092-65228661:+ -0.41 -6.62 9.93E-11 Diabetic kidney disease
THCA cis rs2243480 1 rs4718269 chr7:65200778 CRCP chr7:65579805-65619551:+ 0.28 4.4 1.36E-5 Diabetic kidney disease
THCA cis rs2243480 1 rs4718269 chr7:65200778 RABGEF1 chr7:66093890-66276446:+ -0.53 -6.63 9.33E-11 Diabetic kidney disease
THCA cis rs2243480 1 rs4718270 chr7:65202407 CCT6P1 chr7:65216092-65228661:+ 0.41 6.62 9.93E-11 Diabetic kidney disease
THCA cis rs2243480 1 rs4718270 chr7:65202407 CRCP chr7:65579805-65619551:+ -0.28 -4.4 1.36E-5 Diabetic kidney disease
THCA cis rs2243480 1 rs4718270 chr7:65202407 RABGEF1 chr7:66093890-66276446:+ 0.53 6.63 9.33E-11 Diabetic kidney disease
THCA cis rs875971 1 rs4718307 chr7:65610988 ASL chr7:65540776-65558321:+ 0.16 4.28 2.23E-5 Aortic root size
THCA cis rs875971 1 rs4718307 chr7:65610988 GUSB chr7:65425675-65447246:- -0.27 -5.32 1.61E-7 Aortic root size